Editing Adf08 large.sh

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It maybe a simpler script able to submit the calculations and get the results, but that works.

It creates a submision script nameinput.cmd, and an executable nameinput.lsf, and submits the nameinput.smd to the queue large.

To use it just type:

 adf08_large.sh nameinput

the input file should be called nameinput.in

---

<nowiki>#!/usr/local/bin/ksh</nowiki>

<nowiki>echo '#!/bin/ksh' >$1.cmd</nowiki>

<nowiki>echo '#BSUB -J '$1'.in' >>$1.cmd</nowiki>

<nowiki>echo '#BSUB -q large' >>$1.cmd</nowiki>

<nowiki>echo '#BSUB -o '$1'.log' >>$1.cmd</nowiki>

<nowiki>echo '#BSUB -e '$1'.err' >>$1.cmd</nowiki>

<nowiki>echo '#BSUB -B -N -u mbesora@iciq.es' >>$1.cmd</nowiki>

<nowiki>echo '#BSUB -n 1' >>$1.cmd</nowiki>

<nowiki>echo '#BSUB -R "select[adf0801] span[hosts=1]"' >>$1.cmd</nowiki>

<nowiki>echo ' ' >>$1.cmd</nowiki>

<nowiki>echo 'date' >>$1.cmd</nowiki>

<nowiki>echo 'cd '$TMPDIR/mbesora' ' >>$1.cmd</nowiki>

<nowiki>echo 'cp '$PWD'/'$1'.lsf .' >>$1.cmd</nowiki>

<nowiki>echo ' ' >>$1.cmd</nowiki>


<nowiki>echo '#! /bin/sh' >>$1.lsf</nowiki>

<nowiki>echo 'if test -z "$SCM_TESTOUTPUT" ; then SCM_TESTOUTPUT='$1'.out; fi'>>$1.lsf</nowiki>

<nowiki>echo ' ' >>$1.lsf</nowiki>

<nowiki>echo '$ADFBIN/adf << eor >> $SCM_TESTOUTPUT' >>$1.lsf</nowiki>

<nowiki>echo ' ' >>$1.lsf</nowiki>

<nowiki>cat $1.in >>$1.lsf</nowiki>

<nowiki>chmod 755 $1.lsf</nowiki>


<nowiki>echo 'adf2008.01 ./'$1'.lsf>'$1'.out' >>$1.cmd</nowiki>

<nowiki>echo ' ' >>$1.cmd</nowiki>

<nowiki>echo 'cp '$1'.* '$PWD'/' >>$1.cmd</nowiki>

<nowiki>echo 'rm -f TAPE21 *.t21' >>$1.cmd</nowiki>

<nowiki>bsub < $1.cmd</nowiki>