Useful scripts: Difference between revisions

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TEKLA2 - SENDING VASP CALCULATIONS
go back to [[Main Page]], [[Computational Resources]], [[Chemistry & More]], [[Computational Codes]], [[VASP]]


Connect a ssh session to tekla2:
TEKLA2 [[SENDING CALCULATIONS]]
 
$ ssh your_user_name@tekla2.iciq.es
 
Sending calculations: 
Make a script like the script bellow this lines an change:
 
 
:$NAME as your own script name
 
:$PE can be : c4m8 | c8m24
 
:$PROCESSORS as the number of processors
 
:$VASPVERSION can be: 4.6 | 5.2
 
 
 
#!/bin/bash
#  - Dra. Nuria's Lopez Group  -
##########################################
# SGE Parameters
##########################################
#$ -N $NAME
#$ -pe $PE_mpi $PROCESSORS
#$ -cwd
touch $JOB_NAME.$JOB_ID
cat $TMP/machines >> $JOB_NAME.MACHINES.$JOB_ID
#$ -o $JOB_NAME.o$JOB_ID
#$ -e $JOB_NAME.e$JOB_ID
#$ -S /bin/bash
##########################################
# Load Evironment Variables
##########################################
. /etc/profile.d/modules.sh
module load vasp/$VASPVERSION
##########################################
# Running Jod
##########################################
export OMP_NUM_THREADS=1
mpirun -np $NSLOTS vasp

Latest revision as of 14:10, 28 June 2010