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==General workflow==  
==General workflow==  


in preparation (currently just a sketch)
An XPS calculation is a single ionic step calculation, and involves the explicit computation of core levels for '''one''' selected atom in the POSCAR.  
 
An XPS calculation is a single ionic step calculation, and involves the explicit computation of core levels for ONE selected atom in the POSCAR.  


* For a converged structure select a single atom for which the core levels shifts will be calculated (link to gli script to be added)
* For a converged structure select a single atom for which the core levels shifts will be calculated. Let us suppose that you are interested in the second Pd atom in this POSCAR:
(...)
  Pd  In    O
  4    80    119
(...)  


* Create two separate subdirectries, (for example ./xpsini and ./xpsfin) and copy the the desired POSCAR to both
* The atom(s) for which the XPS will be calculated should be separated: 
(...)
  Pd  '''Pd'''  Pd  In    O
  1  '''1'''  2    80    119
(...)


* copy the files corresponding to your typical setup to "xpsini"
* Create two separate subdirectories, (for example ./xps0 and ./xps1) and copy the modified POSCAR to both.


* in ""xpsini"", insert tags for XPS calculation to INCAR:
* Create a new pseudopotential file.


    ICORELEVEL = 0    # initial state XPS
* Copy the KPOINTS and INCAR files of your typical setup to "xps0" and "xps1". Dipole corrections and ionic movements must be turned off. ISPIN must be turned to 2. It is recommended to deactivate vdW. Comment all parallelization flags to use the default:
    #CLNT = 3          # atom type POSCAR; in this case third species in the POSCAR
  ISPIN  = 2      #
    #CLN = 3           # main quantum number  
# LDIPOL  =
    #CLL = 2            # l quantum number; s=0, p=1, etc.;
# IDIPOL  = 3   
     #CLZ = 1           # 1 or 0.5; number of electrons to be displaced
  IBRION  = -1
  NSW     = 1  


* after the job is completed, grep ENTOT from the OUTCAR (let's call this value E1)
* In "xps0", insert tags for XPS calculation to INCAR:
  ICORELEVEL = 1    # State before excitation XPS.
# CLNT = 2          # species in POSCAR, second in the example.
# CLN  = 3          # main quantum number (3d ==> N=3).
# CLL  = 2          # l quantum number; s=0, p=1, d=2,... 
# CLZ  = 1          # number of electrons to be displaced. Do not use 0.5. 
  NELECT=            # Put the same number of electrons from a normal calculation.


* copy the job files from ""xpsini"" to ""xpsfin""
* After the job is completed:
  grep TOTEN OUTCAR | tail -n 1 # let's call this value E0


* Replace tags for XPS calculation with:
* In parallel, insert tags for XPS calculation to INCAR of xps1:   
  ICORELEVEL = 2    # final state approximation (fss, with electron exitation).
  CLNT = 2          # species in POSCAR, second in the example.
  CLN  = 3          # main quantum number (3d ==> N=3).
  CLL  = 2          # l quantum number; s=0, p=1, d=2,... 
  CLZ  = 1          # number of electrons to be displaced. Do not use 0.5.   
  NELECT=            # For fss, put an additional electron. For iss, don't. 


    ICORELEVEL = 2    # final state XPS; if ICORELEVEL=1 then the core level is computed without electron excitation
* After the job is completed:
    CLNT = 3          # atom type POSCAR; in this case third species in the POSCAR
  grep TOTEN OUTCAR | tail -n 1 # let's call this value E1
    CLN = 3            # main quantum number 
    CLL = 2            # l quantum number; s=0, p=1, etc.;
    CLZ = 1            # 1 or 0.5; number of electrons to be displaced 


* after the job is completed, grep ENTOT from the OUTCAR (let's call this value E2)
* The XPS shift (Exps) can be calculated as:
  Exps = E1 - E0


* The XPS shift (Exps) can be calculated as: Exps = E2 - E1




Alternatively:


compute just ICORELEVEL=2 with one positive charge in the system, then reference the core level energy (grep 3d OUTCAR #for the example above) to vacuum energy. (will elaborate in next edit)
==Additional information==
[[Media:Overview.pdf]] (by Nathan)

Latest revision as of 17:35, 11 January 2022

go back to Main Page, Group Pages, Núria López and Group


General workflow[edit]

An XPS calculation is a single ionic step calculation, and involves the explicit computation of core levels for one selected atom in the POSCAR.

  • For a converged structure select a single atom for which the core levels shifts will be calculated. Let us suppose that you are interested in the second Pd atom in this POSCAR:
(...)
 Pd   In     O 
 4    80    119 
(...) 
  • The atom(s) for which the XPS will be calculated should be separated:
(...)
 Pd  Pd  Pd   In     O 
 1   1   2    80    119 
(...)
  • Create two separate subdirectories, (for example ./xps0 and ./xps1) and copy the modified POSCAR to both.
  • Create a new pseudopotential file.
  • Copy the KPOINTS and INCAR files of your typical setup to "xps0" and "xps1". Dipole corrections and ionic movements must be turned off. ISPIN must be turned to 2. It is recommended to deactivate vdW. Comment all parallelization flags to use the default:
  ISPIN   =  2       #
# LDIPOL  =  F  
# IDIPOL  =  3  
  IBRION  = -1  
  NSW     =  1   
  • In "xps0", insert tags for XPS calculation to INCAR:
  ICORELEVEL = 1     # State before excitation XPS.
# CLNT = 2           # species in POSCAR, second in the example.
# CLN  = 3           # main quantum number (3d ==> N=3). 
# CLL  = 2           # l quantum number; s=0, p=1, d=2,...  
# CLZ  = 1           # number of electrons to be displaced. Do not use 0.5.  
  NELECT=            # Put the same number of electrons from a normal calculation. 
  • After the job is completed:
 grep TOTEN OUTCAR | tail -n 1 # let's call this value E0
  • In parallel, insert tags for XPS calculation to INCAR of xps1:
  ICORELEVEL = 2     # final state approximation (fss, with electron exitation).
  CLNT = 2           # species in POSCAR, second in the example.
  CLN  = 3           # main quantum number (3d ==> N=3).
  CLL  = 2           # l quantum number; s=0, p=1, d=2,...  
  CLZ  = 1           # number of electrons to be displaced. Do not use 0.5.    
  NELECT=            # For fss, put an additional electron. For iss, don't.  
  • After the job is completed:
 grep TOTEN OUTCAR | tail -n 1 # let's call this value E1
  • The XPS shift (Exps) can be calculated as:
 Exps = E1 - E0



Additional information[edit]

Media:Overview.pdf (by Nathan)