Adjust.sh: Difference between revisions
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[[Image:proto1.tgz]], [[Image:proto2.tgz]] | [[Image:proto1.tgz]], [[Image:proto2.tgz]] | ||
and uncompress them. Place the files proto1.sub and proto2.sub in | and uncompress them. Place the files proto1.sub and proto2.sub in a directory of your choice, named for simplicity directory A. | ||
2) | 2) Go to line 35 of adjust.sh and change the path with the path of the directory A. For example: | ||
dir=/hombe/lbellarosa/bin/scripts/VASP ===> dir=/home/nlopez/Trabajo/abracadabra/VASP | |||
3) Now you can run the script typing: | |||
adjust.sh queue processors | |||
Revision as of 14:32, 22 June 2010
go back to Main Page, Computational Resources, Scripts, Useful_scripts
The script adjust.sh prepares a .sub file, ready to be run on the queue you want.
Launching: adjust.sh queue proc
queue is the type of processor where I want to run the calculation
Available options: c0 q0 c4m8 c8m24
proc is the number of processors
Example: you are in the directory ~/Trabajo/blabla and run adjust.sh q0 16 ==> the scripts prepares a file called blabla.sub ready to be run with qsub on q0, 16 procs (tekla1).
Output file: dir.sub (where dir is the directory where you are)
Used files/subprograms: proto1.sub, proto2.sub
INSTALLATION STEPS
1) First of all, download the program:
File:Adjust.tgz
and the files:
File:Proto1.tgz, File:Proto2.tgz
and uncompress them. Place the files proto1.sub and proto2.sub in a directory of your choice, named for simplicity directory A.
2) Go to line 35 of adjust.sh and change the path with the path of the directory A. For example:
dir=/hombe/lbellarosa/bin/scripts/VASP ===> dir=/home/nlopez/Trabajo/abracadabra/VASP
3) Now you can run the script typing:
adjust.sh queue processors