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==Setting up==  
==Setting up==  


Install 'feff'.  
Install [[feff]]. Follow the link for the instructions.  


Install the full 'Demeter' package, that includes the 'Athena' program. It only works well in Windows 64-bits.
Install the full 'Demeter' package, that includes the 'Athena' program. It only works well in Windows 64-bits.

Revision as of 12:41, 28 February 2019

go back to Main Page, Group Pages, Núria López and Group, Scripts_for_VASP, Computational Resources

Data Analysis

Setting up

Install feff. Follow the link for the instructions.

Install the full 'Demeter' package, that includes the 'Athena' program. It only works well in Windows 64-bits.

Pre-processing

Processing

These steps should be done on a terminal, using feff.

Post-processing

These steps should be followed in Athena, from your Virtual machine.

  • Open Athena.
  • Import chi.dat.
  • Select chi(k) as data type.
  • Click in "replot".
  • Select the element and edge. (i.e., Pd, K-edge).
  • Edit k-range [3.0;14.0], dK=1.
  • Select plotting k-weights: 3.
  • Apply a forward Fourier transform.
  • Change plot to R-space, Magnitude-Magnitude. Select and unselect "real part" to update the graph. This will generate a plot |chi(R)| in Å^(-4) as a function of the radial distance in Å.
  • To change the units of chi(R), change the k-weights.
  • In the main window, clic on file > save current group as > chi(R).
  • Save the file as .dat inside your Windows virtual machine. Then move to the shared folder to do the analysis.
  • You can now do a fancy plot in Origin, showing the chi(R) data you got from Athena.