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New page: go back to Main Page, Computational Resources, Chemistry & More, Group Pages *How make easily a NEB: It is necessary have the Initial State (IS) and the Final State (F...
 
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It is necessary have the Initial State (IS) and the Final State (FS), and the vtstscripts from Austin group (http://theory.cm.utexas.edu/vtsttools/scripts/):
It is necessary have the Initial State (IS) and the Final State (FS), and the vtstscripts from Austin group (http://theory.cm.utexas.edu/vtsttools/scripts/):


Initially, copy the CONTCAR of IS and FS to the NEB's directory:
          #> cp ../dir_initial_position/CONTCAR POS1
          #> cp ../dir_final_position/CONTCAR POS2


#> cp ../dir_initial_position/CONTCAR POS1
          #> nebmake.pl POS1 POS2 #IMAGES


#> cp ../dir_final_position/CONTCAR POS2
          #> nebmovie.pl


#> nebmake.pl POS1 POS2 #IMAGES
          #> molden movie.xyz
 
#> nebmovie.pl
 
#> molden movie.xyz

Revision as of 16:32, 6 April 2011

go back to Main Page, Computational Resources, Chemistry & More, Group Pages



  • How make easily a NEB:

It is necessary have the Initial State (IS) and the Final State (FS), and the vtstscripts from Austin group (http://theory.cm.utexas.edu/vtsttools/scripts/):

Initially, copy the CONTCAR of IS and FS to the NEB's directory:

          #> cp ../dir_initial_position/CONTCAR POS1
          #> cp ../dir_final_position/CONTCAR POS2
          #> nebmake.pl POS1 POS2 #IMAGES
          #> nebmovie.pl
          #> molden movie.xyz