Kimik: Difference between revisions
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1/ HOW TO SUBMIT CALCULATIONS: | 1/ HOW TO SUBMIT CALCULATIONS: | ||
Use the qs command. If you type the command “qs” you get a help menu that shows you how to use the command. | Use the qs command. If you type the command “qs” you get a help menu that shows you how to use the | ||
The name of the job in the queue system is that of the input file starting from the end (up to 10 letters). | command. | ||
In qs you can choose queues, there are three in the cluster: | The name of the job in the queue system is that of the input file starting from the end (up to 10 | ||
short queue (s): two machines: “kimik 001” and “kimik 002” in which jobs can last up to one hour, after which the system kills the jobs. | letters). | ||
normal queue (n): it accepts ADF jobs and it goes from nodes 003 to 045. It has no time restrictions. | In qs you can choose queues, there are three in the cluster: | ||
L-queue (l): goes from nodes 046 to 094, it does not allow ADF calculations and has no time restrictions. | short queue (s): two machines: “kimik 001” and “kimik 002” in which jobs can last up to one hour, after | ||
which the system kills the jobs. | |||
normal queue (n): it accepts ADF jobs and it goes from nodes 003 to 045. It has no time restrictions. | |||
L-queue (l): goes from nodes 046 to 094, it does not allow ADF calculations and has no time restrictions. | |||
2/ HOW TO KILL JOBS: | 2/ HOW TO KILL JOBS: | ||
Use the command qdel and the job identifier. | Use the command qdel and the job identifier. | ||
3/ HOW TO CHECK THE STATE OF THE QUEUE: | 3/ HOW TO CHECK THE STATE OF THE QUEUE: | ||
Use qstat command or go to the webpage: kimik.iciq.es/ganglia | Use qstat command or go to the webpage: kimik.iciq.es/ganglia | ||
4/ HOW TO PRINT FROM KIMIK: | 4/ HOW TO PRINT FROM KIMIK: | ||
Laserjet printer: command lpr. The queues are: | Laserjet printer: command lpr. The queues are: | ||
bn1c: prints on one page (1 side, vertically) | bn1c: prints on one page (1 side, vertically) | ||
bn1c2: prints two pages on one side horizontally (booklet style) | bn1c2: prints two pages on one side horizontally (booklet style) | ||
bn1ch: prints one page on one side horizontally | bn1ch: prints one page on one side horizontally | ||
bn2c1: prints on two pages (both sides) vertically | bn2c1: prints on two pages (both sides) vertically | ||
bn2c2: prints two pages on both sides (horizontally, booklet style) | bn2c2: prints two pages on both sides (horizontally, booklet style) | ||
bn2ch: prints one page on both sides horizontally | bn2ch: prints one page on both sides horizontally | ||
Hp printer: command lpr. The queue is called “petita” | Hp printer: command lpr. The queue is called “petita” | ||
Hp color printer: command lpr. The queue is called “color” | Hp color printer: command lpr. The queue is called “color” | ||
Revision as of 08:33, 3 September 2007
Kimik is a (by now) 94 nodes's cluster.
We have 3 queues in it.
nanYar.short
queue with 2 nodes that allows you to run jobs for only 1 hour.
nanYar
queue from node kimik003.iciq.es to kimik045.iciq.es. For running mostly adf jobs (adf has preferences
because licenses are for kimik001 to kimik45 and kimik050) although you can run others one.
nanYar.l
queue from node kimik046.iciq.es to kimik094.iciq.es. Send all kind of (installed) jobs, so for
Gaussian or others please use these queue instead of nanYar (unless there are many free nodes on
nanYar queue).
Kimik server tutorial
Each user has a quota of 15 GB
1/ HOW TO SUBMIT CALCULATIONS:
Use the qs command. If you type the command “qs” you get a help menu that shows you how to use the
command.
The name of the job in the queue system is that of the input file starting from the end (up to 10
letters).
In qs you can choose queues, there are three in the cluster:
short queue (s): two machines: “kimik 001” and “kimik 002” in which jobs can last up to one hour, after
which the system kills the jobs.
normal queue (n): it accepts ADF jobs and it goes from nodes 003 to 045. It has no time restrictions.
L-queue (l): goes from nodes 046 to 094, it does not allow ADF calculations and has no time restrictions.
2/ HOW TO KILL JOBS:
Use the command qdel and the job identifier.
3/ HOW TO CHECK THE STATE OF THE QUEUE:
Use qstat command or go to the webpage: kimik.iciq.es/ganglia
4/ HOW TO PRINT FROM KIMIK:
Laserjet printer: command lpr. The queues are:
bn1c: prints on one page (1 side, vertically)
bn1c2: prints two pages on one side horizontally (booklet style)
bn1ch: prints one page on one side horizontally
bn2c1: prints on two pages (both sides) vertically
bn2c2: prints two pages on both sides (horizontally, booklet style)
bn2ch: prints one page on both sides horizontally
Hp printer: command lpr. The queue is called “petita”
Hp color printer: command lpr. The queue is called “color”