G09
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Gaussian09 vs Gaussian03
Scaling and New Functional Testing
Tests calculations performed at the CESCA supercomputer on parallel8 queue (prades) with 14000MB ram.
Calcfc, opt to TS, and frequency.
Job has 687 basis functions with B3LYP method.
Step G03 G09 calcfc to 2nd l103 7h 54m 08s 3h 42m 10s 2nd opt step 8m 00s 9m 16s 3rd opt step 6m 06s 7m 06s freq 8h 30m 25s 4h 06m 15s Total calc time 16h 38m 39s 8h 04m 47s
So the frequency calculation is about 2x faster in Gaussian09.
The SCF takes longer, but it is using the new GEDIIS algorithm (vs GDIIS in G03 which now doesn't exist). They say GEDIIS should give better performance, especially for calculations not so close to convergence as this example.
Testing new functionals with G09
Job has 687 basis functions, starting structure from B3LYP method in G03.
Step Functional measured M06 M06L B97D calcfc to 1st l103 4h 49m 34s 3h 08m 50s 1h 59m 42s 2nd opt step 13m 36s 10m 32s 7m 42s 3rd opt step 13m 37s 11m 10s 7m 15s Total opt time 19h 05m 32s 7h 19m 06s 3h 36m 35s No. steps 89 44 32 avg opt step time 772s 599s 406s freq 5h 27m 59s 3h 15m 04s 2h 11m 48s Total calc time 29h 50m 18s 14h 04m 42s 7h 48m 5s
The M06 functional is 33% slower than B3LYP (based on the frequency times), but still faster than B3LYP in G03. M06L is slightly faster than B3LYP.
Grimme's B97D functional is very fast, and also takes less steps to optimize in this case too.
Solvation models, Polarizable Continuum Model (PCM)
As in Gaussian03, the SCRF keyword requests that a calculation be performed in the presence of a solvent by placing the solute in a cavity within the solvent reaction field.
- The integral equation formalism variant IEFPCM, is the default SCRF method. It has not changed from Gaussian03, BUT the formalism used and its implementation has changed. That is: you will get different results, using the same method in G03 and G09.
- The default RADII used in G03 was UAO , whilst now is UFF with spheres placed by default on all Hydrogen atoms. No need to use the SPHEREONH= keyword, except if you use UAO or another radii model that does not have them explicitly.
- It seems to give no "convergence failure" problems, but maybe its too early to say so.
- It is able to perform frequency calculations in solvent, giving enthalpies, free energies, ZPE corrections...
Calculation of solvent effects
Some tests performed on some organic and inorganic species, show that using the default settings (for Gaussian03 defaults + SPHEREONH) the relative energies of a system are on average around 1.5 kcal/mol different between one and the other version of the program. The differences found range between 0.8 and 3.9 kcal/mol.
Some of the species tested are:
g09 g03 ([Fe]-H2+) + N(CH3)3 0 0 ([Fe]-H2+) + N(CH3)3 -1.7 -0.6 ([Fe]-H-H-N(CH3)3+) -2.6 1.3 ([Fe]-H) + (+H-N(CH3)3) 5.0 8.1 ---- (BF4-) + N(CH3)3 + (Fe-H2+) 0 0 (BF4-N(CH3)3-) + (Fe-H2+) -3.3 -1.9 ([Fe]-H2···BF4) + (N(CH3)3) -13.3 -12.1 ([Fe]-H2··BF4··N(CH3)3) -17.3 -14.7 ([Fe]-H-H-N(CH3)3··BF4) -19.7 -16.2 (BF4-···H-N(CH3)3) + (Fe-H2+) -18.1 -15.8
energies in kcal/mol.[Fe] is an iron transition metal complex.
According to these results, at least for some systems, the relative energies are significantly different.
Optimization in solvent
- Optimized structures in gas phase of 300-400 basis sets can be re-optimized in solvent in a period of 7 hours- 1 day at cesca (cadi nodes). In some cases the optimization is achieved in few cycles (16), in most cases between 20-40 but and in few other cases up to 120 cycles are needed.
- Frequency calculations on these structures can be performed in a period of around 3 hours at cadi.
- The relative energies of some of the optimized species are:
(in kcal/mol) SP OPT (BF4-) + N(CH3)3 + (Fe-H2+) 0 0 (BF4-N(CH3)3-) + (Fe-H2+) -3.3 -3.7 ([Fe]-H2···BF4) + (N(CH3)3) -13.3 -15.4 ([Fe]-H2··BF4··N(CH3)3) -17.3 -19.3 ([Fe]-H-H-N(CH3)3··BF4) -19.7 -21.5 (BF4-···H-N(CH3)3) + (Fe-H2+) -18.1 -20.6
Over the tests performed, the difference between the relative energies of the optimized species and the relative energies of the single points are in average: 0.6 kcal/mol.The differences range between +1.1 to -2.5 kcal/mol.
- Optimizations without previous gas phase optimization.